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branch gstreamer-update updated (3e318d7 -> 60b8739)


From: ???
Subject: branch gstreamer-update updated (3e318d7 -> 60b8739)
Date: Wed, 03 Feb 2016 04:24:52 +0000

iyzsong pushed a change to branch gstreamer-update
in repository guix.

      from  3e318d7   gnu: gst-plugins-base: Use 'modify-phases'.
      adds  c2af026   Revert "gnu: Add iftop."
      adds  765973c   gnu: Add iftop.
      adds  2d8211a   gnu: american-fuzzy-lop: Fix qemu configure flags.
      adds  b6d937d   gnu: american-fuzzy-lop: Update to 1.96b.
      adds  ebf89f1   gnu: fuse: Update to 2.9.5 [fixes CVE-2016-1233].
      adds  c0266e8   gnu: star: Use "modify-phases" syntax.
      adds  3062d75   gnu: star: Update to 2.5.1b.
      adds  94ce537   gnu: Add TopHat.
      adds  3a40a92   gnu: Add cufflinks.
      adds  2156571   gnu: claws-mail: Update to 3.13.2.
      adds  fe17fb4   gnu: letsencrypt and acme: Update to 0.2.0.
      adds  c518446   build: container: Make 
'unprivileged-user-namespace-supported?' more robust.
      adds  4c73302   gnu: nano: Update to 2.5.1.
      adds  17206f7   gnu: myrepos: Update to 1.20160123.
      adds  be866fb   gnu: tor: Update to 0.2.7.6.
      adds  6b6a62d   gnu: privoxy: Update to 3.0.24.
      adds  8ddc5d5   gnu: yoshimi: Update to 1.3.8.2.
      adds  a763ce7   gnu: Add Qtractor.
      adds  541ed7b   gnu: cross-gcc-arguments: Enable C++, disable building of 
libstdc++-v3.
      adds  447f3ae   gnu: calibre: Update to 2.49.0.
      adds  74273b6   doc: Fix typo in section on offloading.
      adds  bcadaf0   gnu: Add sortmerna.
      adds  9059b97   doc: 'base-initrd' has #:virtio? default to #t.
      adds  f6afc48   gnu: grue-hunter: Use 'https' URL.
      adds  24a8ef3   doc: Remove unneeded backslashes.
      adds  880d647   doc: Add policy about version numbers for VCS snapshots.
      adds  23f3cbb   gnu: Add pixz.
      adds  2259442   gnu: cmocka: New variable.
      adds  8581f4c   gnu: Add python-efl.
      adds  0a2a2b3   emacs: Rename 'file-path' to 'file-name'.
      adds  71310cc   emacs: Add 'guix-browse-license-url' command.
      adds  cefb7ae   emacs: Buttonize licenses in "Package Info".
      adds  83aab70   emacs: Add 'guix-packages-by-license' command.
      adds  6dd460c   emacs: list: Support displaying URL links.
      adds  687c9bc   emacs: Add interface for licenses.
      adds  0833d0c   gnu: aspell-dict-en: Update to 2016.01.19-0.
      adds  d3b39bc   gnu: ngs-sdk: Update to 1.2.3.
      adds  fe91666   gnu: ncbi-vdb: Update to 2.5.7.
      adds  a78d62f   gnu: sra-tools: Update to 2.5.7.
      adds  7c8131c   gnu: Add ruby-rubytest.
      adds  90fcedf   gnu: Add ruby-brass.
      adds  120fc74   gnu: Add ruby-qed.
      adds  9273ee8   gnu: Add ruby-ae.
      adds  78bb471   gnu: Add ruby-lemon.
      adds  0832804   gnu: Add ruby-rubytest-cli.
      adds  72ccbfe   gnu: Add ruby-hashery.
      adds  1f1d71e   gnu: Add ruby-rc4.
      adds  f3e085a   gnu: Add ruby-afm.
      adds  acb6be4   gnu: Add ruby-ascii85.
      adds  edf8caa   gnu: Add ruby-ttfunk.
      adds  61eecd7   gnu: alsa-modular-synth: Update to 2.1.2.
      adds  97d7625   doc: Show how to boot result of 'vm-image'.
      adds  7432386   gnu: nginx: Update to 1.8.1 [fixes 
CVE-2016-{0742,0746,0747}].
      adds  bb2120c   gnu: libressl: Update to 2.2.5.
      adds  cd44f1c   gnu: c-ares: Move to adns.scm.
      adds  f66842d   gnu: Add aria2.
      adds  8092e33   gnu: Add ruby-turn.
      adds  39dc0eb   gnu: Add ruby-minitest-focus.
      adds  99fc5cd   gnu: Add ruby-minitest-pretty-diff.
      adds  685d0d2   gnu: Add ruby-minitest-moar.
      adds  e07ef1d   gnu: Add ruby-minitest-bonus-assertions.
      adds  e582fa9   gnu: Add ruby-minitest-rg.
      adds  32d1c06   gnu: Add ruby-mime-types-data.
      adds  eb5e0bd   gnu: Add ruby-fivemat.
      adds  d39b606   gnu: Add ruby-mime-types.
      adds  4fea500   gnu: Add ruby-sqlite3.
      adds  4dfa39c   gnu: Add ruby-shoulda-context.
      adds  e4fea00   gnu: Add ruby-shoulda-matchers.
      adds  3885c58   gnu: Add ruby-shoulda-matchers-2.
      adds  6f39071   gnu: Add ruby-shoulda.
      adds  3b44bcd   gnu: Add ruby-unf.
      adds  5799aad   gnu: Add ruby-domain-name.
      adds  d114cee   gnu: Add ruby-http-cookie.
      adds  e932d37   gnu: Add snapshot of the GNU Shepherd.
      adds  c273d81   services: dmd: Provide dmd via 'profile-service-type'.
      adds  9a8b9eb   services: guix: Provide Guix via 'profile-service-type'.
      adds  133056b   gnu: shepherd: Update to 0.3.
      adds  3dcbb75   gnu: bash: Install more headers in "include" output.
      adds  c30f652   gnu: bash: Use 'install-file' instead of 'mkdir-p' and 
'copy-file'.
      adds  b747a9d   gnu: recutils: Build the Bash builtin, readrec.
      adds  71eb843   gnu: unzip: Reorganize security fixes for improved 
clarity.
      adds  c6e030b   utils: Have search-path-as-list pattern search for 
directories.
      adds  e17d513   gnu: ghc: Add GHC_PACKAGE_PATH native search path.
      adds  9eb681a   gnu: grep: Update to 2.22.
      adds  4655f51   gnu: xz: Update to 5.2.2.
      adds  f7dbeb3   build-system/gnu: Set 'SOURCE_DATE_EPOCH'.
      adds  6f4b23e   gnu: emacs: Honor 'SOURCE_DATE_EPOCH'.
      adds  b85d098   gnu: file: Update to 5.25.
      adds  0cc2284   gnu: procps: Update to 3.3.11.
      adds  90c59e9   gnu: gmp: Update to 6.1.0.
      adds  e946b60   ld-wrapper: Compute the library search path globally.
      adds  e414a7d   gnu: gmp: Drop patch included in release 6.1.0.
      adds  d7e92b8   gnu: Move pkg-config to native inputs.
      adds  6a4db3f   gnu: libarchive: Fix test failure on SELinux systems.
      adds  1350658   gnu: texinfo: Remove unneeded dependency on xz.
      adds  557b555   gnu: commencement: Restrict allowed references for 
libstdc++.
      adds  52cfd8c   gnu: gcc-final: Remove unnecessary CPPFLAGS.
      adds  98bd851   gnu: gcc: Use the system zlib.
      adds  e82e55e   Merge branch 'master' into core-updates
      adds  7dda44a   build: Add missing patches to the distribution.
      adds  4165fda   gnu: gmp: Disable parallel tests.
      adds  4de3507   gnu: perl: Update to 5.22.0.
      adds  4187fe7   gnu: perl: Build deterministically, and make byproducts 
deterministic.
      adds  775e6fe   gnu: commencement: Initial Texinfo uses initial Perl.
      adds  a2a9bba   gnu: bash: Update to patch level 42.
      adds  304e4f5   gnu: grep: Add missing dependency on Perl.
      adds  4d28b97   gnu: bash: Add "doc" output.
      adds  de6d9f4   gnu: ncurses: Add 'TERMINFO_DIRS' search path variable.
      adds  27ec962   gnu: ncurses: Add "doc" output.
      adds  d7170f4   gnu: gettext: Add "doc" output.
      adds  0573bb5   gnu: util-linux: Do not build static libraries.
      adds  6042f40   gnu: pcre: Add "doc" output.
      adds  c5b65f7   gnu: glibc: Remove timestamp from 'nscd' binary.
      adds  8309c38   gnu: commencement: Use GMP 6.0.0a for bootstrapping.
      adds  009b53f   gnu: gcc: Prefer language-specific variables over 'CPATH'.
      adds  09964b4   gnu: commencement: Add "-boot0" to early packages.
      adds  32243bf   gnu: commencement: Avoid redundant Perl rebuild.
      adds  f1e0c85   gnu: commencement: Build the final Bash with 
"bison-boot1".
      adds  3eb34c6   build-system/gnu: Always pass "-D" to strip/objcopy.
      adds  53088d0   gnu: commencement: Build Bison deterministically.
      adds  64cb064   gnu: python-wrapper: Append "-wrapper" to the underlying 
package name.
      adds  05f1e95   gnu: guile-2.0: Add "lib/guile/2.0/ccache" to the search 
path.
      adds  7165a91   build-system/gnu: Use the long option name for 
deterministic archives.
      adds  e80d255   gnu: findutils: Update to 4.6.0.
      adds  8d0801a   gnu: libgc: Enable C++ support.
      adds  dd1937d   gnu: pkg-config: Update to 0.29.
      adds  1575dcd   gnu: grep: Skip timing-sensitive test.
      adds  53334dd   Merge branch 'master' into core-updates
      adds  82cb851   gnu: tzdata: Update to 2015g.
      adds  4478dbd   gnu: libgpg-error: Update to 1.21.
      adds  4f2ca23   gnu: libgcrypt: Update to 1.6.4.
      adds  a2ab82d   gnu: python: Honor 'C_INCLUDE_PATH'.
      adds  e8e2e18   gnu: Read 'C_INCLUDE_PATH' instead of 'CPATH'.
      adds  0beb65b   build-system/gnu: Add 'set-SOURCE-DATE-EPOCH' phase.
      adds  3ea110b   gnu: libtasn1: Update to 4.7.
      adds  5a75865   gnu: gnutls: Update to 3.4.7.
      adds  d99861d   gnu: gettext: Update to 0.19.7.
      adds  e5f0376   gnu: gettext: Use "modify-phases" syntax.
      adds  bfcb7bc   gnu: libffi: Update to 3.2.1.
      adds  93b3a8b   gnu: flex: Update to 2.6.0.
      adds  b247651   gnu: sqlite: Update to 3.10.0.
      adds  209e09f   gnu: zlib: Update to 1.2.8.
      adds  20c620d   gnu: attr: Use 'modify-phases'.
      adds  195f557   gnu: attr: Update to 2.4.47.
      adds  3918146   gnu: ruby-power-assert: Update to 0.2.7.
      adds  048036a   gnu: ruby-yard: Disable failing test.
      adds  761e704   ruby: Abstract out path to GEM_HOME.
      adds  9656b8b   gnu: ruby: Use modify-phases.
      adds  65e84e3   gnu: ruby: Update to 2.3.0.
      adds  ce3ac66   gnu: perl: Update to 5.22.1.
      adds  203795a   gnu: perl: Add fix for CVE-2015-8607.
      adds  8c986ab   Merge branch 'master' into core-updates
      adds  724eaef   tests: Use sed instead of grep as a package with no 
dependencies.
      adds  ca7ef4d   gnu: cross-gcc-arguments: Enable C++, disable building of 
libstdc++-v3.
      adds  76002e5   gnu: gawk: Protect against random failures of the 'fts' 
test.
      adds  89b4823   gnu: automake: Adjust to deal with Perl 5.22.
      adds  8d9bae4   gnu: librsvg: Update to 2.40.13 [fixes CVE-2015-7558].
      adds  ca3f995   gnu: ffmpeg: Update to 2.8.5.
      adds  bb8afbf   gnu: Add dependency on Perl's 'Module::Build' as needed.
      adds  afe9f40   Merge branch 'master' into core-updates
      adds  252dded   build-system/haskell: Fix package.conf parsing.
      adds  7c853c0   gnu: doxygen: Update to 1.8.11.
      adds  05944b3   gnu: doxygen: Drop propagated input graphviz.
      adds  7b158c4   gnu: Add perl-cgi.
      adds  97b07aa   gnu: Add perl-module-pluggable.
      adds  a2190cc   gnu: Add dependencies on Perl modules as needed.
      adds  86fa2ea   gnu: libtiff: Update to 4.0.6.  Add fixes for 
CVE-2015-{8665,8683}.
      adds  1022da1   gnu: texi2html: Disable tests.
      adds  6871628   gnu: mozjs: Make milestone.pl compatible with Perl 5.22+.
      adds  412bee5   Merge branch 'master' into core-updates
      adds  46854e9   gnu: webkitgtk-2.4, webkitgtk/gtk+-2, qt: Disable 
parallel builds.
      adds  a394c60   gnu: hop: Add input avahi.
      adds  29a7801   gnu: icecat: Add fixes for CVE-2016-{1930,1935} and other 
bugs.
      adds  593c366   Merge branch 'core-updates'
      adds  559239a   gnu: icedtea-6: Update to 1.13.10.
      adds  03675ca   gnu: icedtea-7: Update to 2.6.4.
      adds  052d53d   tests: Use 'dummy-origin' for lint tests when possible.
      adds  90ca918   lint: Remove an unneeded clause in 
'check-patch-file-names'.
      adds  f3044a4   lint: Rewrite 'check-patch-file-names'.
      adds  74e667d   packages: Use '@' in package record printers.
      adds  8c3d889   build: Add 'DL' silent rule.
      adds  4c48878   build: Add 'DOT' silent rule.
      adds  71ed439   build: Add 'EMACS' silent rule.
      adds  8dddedf   build: Add 'HELP2MAN' silent rule.
      adds  5452374   build: Remove guix-autoloads.el from the distribution.
      adds  e71ad29   build: Use 'GEN' and 'at' silent rules.
      adds  8a76e5f   Update .gitignore.
      adds  f88f0d2   gnu: ffmpeg: Add hardware acceleration, opengl support.
      adds  c3f29bc   gnu: Add gtk-vnc.
      adds  2c77615   gnu: guix: Update development snapshot to c3f29bc.
      adds  13fe489   gnu: emacs: Find packages in "~/.guix-profile".
      adds  6d97319   doc: Describe how Emacs packages are found.
      adds  d312a83   gnu: elogind: Use 'shepherd' input.
      adds  34044d5   Use 'shepherd' instead of 'dmd' as init system.
      adds  b8c02c1   Rename '/root/etc/dmd' directory and 'do-not-kill' file.
      adds  dd17bc3   doc: Replace references to 'dmd' with 'shepherd'.
      adds  0190c1c   Rename (gnu services dmd) to (gnu services shepherd).
      adds  fe1ad5f   services: shepherd: Rename shepherd configuration file.
      adds  26b9486   services: xorg: Use 'shepherd' instead of 'dmd'.
      adds  d4053c7   services: Rename 'dmd' services to 'shepherd'.
      adds  710fa23   guix system: Rename 'dmd-graph' to 'shepherd-graph'.
      adds  171a0a1   Rename 'dmd' to 'shepherd' in comments and strings.
      adds  3662909   build: Generate man pages after compiling Guile objects.
      adds  692bb77   gnu: pumpa: Update to 0.9.2.
      adds  39eefce   gnu: weechat: Update to 1.4.
      adds  e5a2ede   gnu: perl-tk: Update to 804.033.
      adds  d1a0bba   gnu: obs: Update to 0.13.0.
      adds  921d9dc   license: Add giftware.
      adds  154f615   gnu: Add allegro-4.
      adds  2a068ae   gnu: Add aseprite.
      adds  f1d9231   gnu: python-pillow: Update to 3.1.0.
      adds  55ba649   gnu: wayland: Build documentation.
      adds  917708c   gnu: python-apsw: Update to 3.9.2-r1.
      adds  e3f755f   gnu: Add pinball.
      adds  ff853a2   build: Use the right section and source for man pages.
      adds  efdcb6f   install: Make it clear that we refer to the root by label.
      adds  629a064   guix build: Transformations operate on single objects.
      adds  ccd7158   doc: Add subsections to 'Invoking guix build'.
      adds  88ad6de   guix build: Separate transformation options.
      adds  b8638f0   guix package: Support package transformation options.
      adds  689b658   build: Really enable Guile warnings.
      adds  a4db2dd   build: Remove semicolons from Guile warnings.
      adds  f0907d9   build-system/python: Use 'ensure-keyword-arguments'.
      adds  47c0f92   guix build: Add '--with-input'.
      adds  70fd33e   emacs: command: Disambiguate "w" key in build options.
      adds  6009df6   gnu: ccache: Update to 3.2.4.
      adds  2c5e497   gnu: keepassx: Update to 2.0.1.
      adds  4efc8eb   gnu: Update socat to 1.7.3.1.
      adds  5e764e2   gnu: linux-libre: Update to 4.4.1.
      adds  17db070   gnu: linux-libre: Generalize 'kernel-config' to support 
variants.
      adds  adddd5b   gnu: Add linux-libre-4.1.
      adds  0889321   gnu: ntp: Update to 4.2.8p6.
      adds  ce294c0   gnu: Update sortmerna to 2.1.
      adds  2b2f2fc   gnu: Add python-colorama.
      adds  f5bcec6   gnu: Add python-rsa.
      adds  c0aacfa   gnu: Add python-pluggy.
      adds  a4af21c   gnu: Add python-tox.
      adds  ba9da24   gnu: Add python-jmespath.
      adds  935fcd5   gnu: Add python-botocore.
      adds  f861b8b   gnu: Add awscli.
      adds  6a44697   gnu: Add python-hypothesis.
      adds  aaa49e8   licenses: Add the Unlicense.
      adds  7517e73   gnu: Add python-pytest-subtesthack.
      adds  8c44dab   gnu: vdirsyncer: Update to 0.8.1.
      adds  81fc64d   gnu: aspell: Wrap binary to find dictionaries.
      adds  400ed6a   gnu: eudev: Add variant that depends on libblkid.
      adds  e81e5fa   gnu: openssl: Add alternate url.
      adds  6a20384   gnu: webkitgtk: Update to 2.10.7.
      adds  4c28ca1   gnu: yelp: Update to 3.18.1.
       new  60b8739   Merge branch 'master' into gstreamer-update

The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 .gitignore                                         |  158 +-
 Makefile.am                                        |   41 +-
 NEWS                                               |    4 +-
 ROADMAP                                            |    2 +-
 build-aux/compile-all.scm                          |   20 +-
 build-aux/download.scm                             |    2 +-
 build-aux/hydra/demo-os.scm                        |    2 +-
 daemon.am                                          |   11 +-
 doc.am                                             |  109 +-
 doc/emacs.texi                                     |   28 +-
 doc/guix.texi                                      |  676 +-
 doc/images/dmd-graph.dot                           |   75 -
 doc/images/service-graph.dot                       |   14 +-
 doc/images/shepherd-graph.dot                      |   75 +
 emacs.am                                           |   16 +-
 emacs/guix-command.el                              |    9 +-
 emacs/guix-info.el                                 |    6 +-
 emacs/guix-license.el                              |  130 +
 emacs/guix-list.el                                 |   27 +-
 emacs/guix-main.scm                                |   63 +
 emacs/guix-messages.el                             |   15 +
 emacs/guix-read.el                                 |   11 +-
 emacs/guix-ui-generation.el                        |    2 +-
 emacs/guix-ui-package.el                           |   24 +-
 emacs/guix-ui-system-generation.el                 |    2 +-
 gnu-system.am                                      |   77 +-
 gnu/build/install.scm                              |    2 +-
 gnu/build/linux-boot.scm                           |    8 +-
 gnu/build/linux-container.scm                      |    2 +-
 gnu/packages/admin.scm                             |   29 +-
 gnu/packages/adns.scm                              |   29 +-
 gnu/packages/aria2.scm                             |   49 -
 gnu/packages/aspell.scm                            |   16 +-
 gnu/packages/attr.scm                              |   67 +-
 gnu/packages/audio.scm                             |    4 +-
 gnu/packages/autotools.scm                         |    6 +-
 gnu/packages/backup.scm                            |    3 +-
 gnu/packages/base.scm                              |   34 +-
 gnu/packages/bash.scm                              |   33 +-
 gnu/packages/bdw-gc.scm                            |   15 +-
 gnu/packages/bioinformatics.scm                    |  238 +-
 gnu/packages/bittorrent.scm                        |   67 +-
 gnu/packages/ccache.scm                            |    7 +-
 gnu/packages/check.scm                             |   25 +
 gnu/packages/cmake.scm                             |    2 +-
 gnu/packages/commencement.scm                      |  155 +-
 gnu/packages/compression.scm                       |   39 +-
 gnu/packages/cross-base.scm                        |   15 +-
 gnu/packages/databases.scm                         |   17 +-
 gnu/packages/dav.scm                               |    8 +-
 gnu/packages/debug.scm                             |   18 +-
 gnu/packages/doxygen.scm                           |   29 +-
 gnu/packages/ebook.scm                             |    4 +-
 gnu/packages/emacs.scm                             |   56 +-
 gnu/packages/enlightenment.scm                     |   40 +-
 gnu/packages/file.scm                              |    4 +-
 gnu/packages/flex.scm                              |    6 +-
 gnu/packages/freedesktop.scm                       |    5 +-
 gnu/packages/game-development.scm                  |  114 +-
 gnu/packages/games.scm                             |   40 +-
 gnu/packages/gawk.scm                              |    6 +-
 gnu/packages/gcc.scm                               |   63 +-
 gnu/packages/gettext.scm                           |   66 +-
 gnu/packages/glib.scm                              |    4 +-
 gnu/packages/gnome.scm                             |   57 +-
 gnu/packages/gnupg.scm                             |    8 +-
 gnu/packages/gnuzilla.scm                          |   38 +-
 gnu/packages/grue-hunter.scm                       |    2 +-
 gnu/packages/guile.scm                             |    3 +-
 gnu/packages/haskell.scm                           |    6 +
 gnu/packages/image.scm                             |   10 +-
 gnu/packages/java.scm                              |   27 +-
 gnu/packages/language.scm                          |    7 +-
 gnu/packages/ld-wrapper.in                         |   66 +-
 gnu/packages/libffi.scm                            |    7 +-
 gnu/packages/linux-libre-4.1-i686.conf             | 8314 ++++++++++++++++++++
 gnu/packages/linux-libre-4.1-x86_64.conf           | 8114 +++++++++++++++++++
 gnu/packages/linux.scm                             |  149 +-
 gnu/packages/mail.scm                              |    7 +-
 gnu/packages/multiprecision.scm                    |   28 +-
 gnu/packages/music.scm                             |   44 +-
 gnu/packages/nano.scm                              |    6 +-
 gnu/packages/ncurses.scm                           |   38 +-
 gnu/packages/networking.scm                        |    4 +-
 gnu/packages/ntp.scm                               |    4 +-
 gnu/packages/package-management.scm                |    6 +-
 gnu/packages/password-utils.scm                    |    5 +-
 gnu/packages/patches/automake-regexp-syntax.patch  |   34 +
 gnu/packages/patches/doxygen-test.patch            |    4 +-
 gnu/packages/patches/doxygen-tmake.patch           |   24 -
 gnu/packages/patches/emacs-source-date-epoch.patch |   20 +
 .../patches/findutils-absolute-paths.patch         |   29 -
 gnu/packages/patches/findutils-test-xargs.patch    |   22 +
 gnu/packages/patches/flex-bison-tests.patch        |   24 -
 gnu/packages/patches/gawk-fts-test.patch           |   51 +
 gnu/packages/patches/gnutls-doc-fix.patch          |  546 --
 gnu/packages/patches/grep-CVE-2015-1345.patch      |   17 -
 .../patches/grep-timing-sensitive-test.patch       |   15 +
 .../patches/icecat-CVE-2016-1930-pt01.patch        |   34 +
 .../patches/icecat-CVE-2016-1930-pt02.patch        |   33 +
 .../patches/icecat-CVE-2016-1930-pt03.patch        |  308 +
 .../patches/icecat-CVE-2016-1930-pt04.patch        |   47 +
 .../patches/icecat-CVE-2016-1930-pt05.patch        |   51 +
 .../patches/icecat-CVE-2016-1930-pt06.patch        |  170 +
 .../patches/icecat-CVE-2016-1930-pt07.patch        |   56 +
 .../patches/icecat-CVE-2016-1930-pt08.patch        |   48 +
 .../patches/icecat-CVE-2016-1930-pt09.patch        |  189 +
 .../patches/icecat-CVE-2016-1930-pt10.patch        |   33 +
 .../patches/icecat-CVE-2016-1930-pt11.patch        |  183 +
 .../patches/icecat-CVE-2016-1930-pt12.patch        |   91 +
 .../patches/icecat-CVE-2016-1930-pt13.patch        |   34 +
 .../patches/icecat-CVE-2016-1930-pt14.patch        |   83 +
 .../patches/icecat-CVE-2016-1930-pt15.patch        |   35 +
 gnu/packages/patches/icecat-CVE-2016-1935.patch    |   77 +
 gnu/packages/patches/icecat-bug-1146335-pt1.patch  |  141 +
 gnu/packages/patches/icecat-bug-1146335-pt2.patch  |   43 +
 .../icecat-limit-max-buffers-size-for-ANGLE.patch  |   73 +
 gnu/packages/patches/libarchive-bsdtar-test.patch  |   74 +
 gnu/packages/patches/librsvg-tests.patch           |   27 -
 .../libtiff-CVE-2015-8665+CVE-2015-8683.patch      |  107 +
 .../patches/libtiff-oob-accesses-in-decode.patch   |  171 +
 .../patches/libtiff-oob-write-in-nextdecode.patch  |   49 +
 .../patches/linux-libre-CVE-2016-0728.patch        |   84 -
 gnu/packages/patches/perl-CVE-2015-8607.patch      |   68 +
 .../patches/perl-deterministic-ordering.patch      |   29 +
 .../patches/perl-module-pluggable-search.patch     |   16 +-
 gnu/packages/patches/perl-no-build-time.patch      |   26 +
 gnu/packages/patches/perl-no-sys-dirs.patch        |  152 +-
 gnu/packages/patches/perl-source-date-epoch.patch  |   19 +
 gnu/packages/patches/perl-tk-x11-discover.patch    |   14 -
 gnu/packages/patches/pinball-const-fix.patch       |   11 +
 gnu/packages/patches/pinball-cstddef.patch         |   38 +
 .../patches/pinball-missing-separators.patch       |  101 +
 gnu/packages/patches/pinball-src-deps.patch        |   24 +
 gnu/packages/patches/pinball-system-ltdl.patch     |   18 +
 gnu/packages/patches/procps-make-3.82.patch        |   14 -
 gnu/packages/patches/python-2.7-search-paths.patch |    6 +-
 gnu/packages/patches/python-3-search-paths.patch   |    6 +-
 .../patches/tophat-build-with-later-seqan.patch    |   24 +
 gnu/packages/pcre.scm                              |    2 +
 gnu/packages/perl.scm                              |  120 +-
 gnu/packages/pkg-config.scm                        |    6 +-
 gnu/packages/plotutils.scm                         |    4 +-
 gnu/packages/pulseaudio.scm                        |   11 +-
 gnu/packages/pumpio.scm                            |    6 +-
 gnu/packages/python.scm                            |  274 +-
 gnu/packages/qt.scm                                |    7 +-
 gnu/packages/ruby.scm                              | 1017 +++-
 gnu/packages/scheme.scm                            |    3 +-
 gnu/packages/tcl.scm                               |    6 +-
 gnu/packages/texinfo.scm                           |    8 +-
 gnu/packages/tls.scm                               |   43 +-
 gnu/packages/tor.scm                               |    9 +-
 gnu/packages/version-control.scm                   |    6 +-
 gnu/packages/video.scm                             |   12 +-
 gnu/packages/web.scm                               |   60 +-
 gnu/packages/webkit.scm                            |   18 +-
 gnu/packages/weechat.scm                           |    4 +-
 gnu/packages/zsh.scm                               |   56 +-
 gnu/services.scm                                   |    6 +-
 gnu/services/avahi.scm                             |   12 +-
 gnu/services/base.scm                              |  149 +-
 gnu/services/databases.scm                         |   10 +-
 gnu/services/dbus.scm                              |   10 +-
 gnu/services/desktop.scm                           |   22 +-
 gnu/services/dmd.scm                               |  273 -
 gnu/services/lirc.scm                              |   10 +-
 gnu/services/mail.scm                              |   12 +-
 gnu/services/networking.scm                        |   56 +-
 gnu/services/shepherd.scm                          |  278 +
 gnu/services/ssh.scm                               |   12 +-
 gnu/services/web.scm                               |   10 +-
 gnu/services/xorg.scm                              |   24 +-
 gnu/system.scm                                     |   18 +-
 gnu/system/install.scm                             |    9 +-
 guix/build-system/gnu.scm                          |    8 +-
 guix/build-system/python.scm                       |   13 +-
 guix/build/gnu-build-system.scm                    |   16 +-
 guix/build/haskell-build-system.scm                |   99 +-
 guix/build/python-build-system.scm                 |    9 +-
 guix/build/ruby-build-system.scm                   |   13 +-
 guix/build/utils.scm                               |    9 +-
 guix/import/cabal.scm                              |    2 +-
 guix/import/elpa.scm                               |    2 +-
 guix/licenses.scm                                  |   13 +
 guix/packages.scm                                  |    2 +-
 guix/scripts/build.scm                             |  211 +-
 guix/scripts/lint.scm                              |   34 +-
 guix/scripts/package.scm                           |   16 +-
 guix/scripts/system.scm                            |   50 +-
 guix/search-paths.scm                              |    6 -
 po/guix/POTFILES.in                                |    2 +-
 tests/graph.scm                                    |    2 +-
 tests/guix-build.sh                                |   14 +-
 tests/guix-system.sh                               |    8 +-
 tests/lint.scm                                     |   12 +-
 tests/packages.scm                                 |    4 +-
 tests/scripts-build.scm                            |   88 +
 tests/services.scm                                 |   16 +-
 199 files changed, 23979 insertions(+), 2720 deletions(-)
 delete mode 100644 doc/images/dmd-graph.dot
 create mode 100644 doc/images/shepherd-graph.dot
 create mode 100644 emacs/guix-license.el
 delete mode 100644 gnu/packages/aria2.scm
 create mode 100644 gnu/packages/linux-libre-4.1-i686.conf
 create mode 100644 gnu/packages/linux-libre-4.1-x86_64.conf
 create mode 100644 gnu/packages/patches/automake-regexp-syntax.patch
 delete mode 100644 gnu/packages/patches/doxygen-tmake.patch
 create mode 100644 gnu/packages/patches/emacs-source-date-epoch.patch
 delete mode 100644 gnu/packages/patches/findutils-absolute-paths.patch
 create mode 100644 gnu/packages/patches/findutils-test-xargs.patch
 delete mode 100644 gnu/packages/patches/flex-bison-tests.patch
 create mode 100644 gnu/packages/patches/gawk-fts-test.patch
 delete mode 100644 gnu/packages/patches/gnutls-doc-fix.patch
 delete mode 100644 gnu/packages/patches/grep-CVE-2015-1345.patch
 create mode 100644 gnu/packages/patches/grep-timing-sensitive-test.patch
 create mode 100644 gnu/packages/patches/icecat-CVE-2016-1930-pt01.patch
 create mode 100644 gnu/packages/patches/icecat-CVE-2016-1930-pt02.patch
 create mode 100644 gnu/packages/patches/icecat-CVE-2016-1930-pt03.patch
 create mode 100644 gnu/packages/patches/icecat-CVE-2016-1930-pt04.patch
 create mode 100644 gnu/packages/patches/icecat-CVE-2016-1930-pt05.patch
 create mode 100644 gnu/packages/patches/icecat-CVE-2016-1930-pt06.patch
 create mode 100644 gnu/packages/patches/icecat-CVE-2016-1930-pt07.patch
 create mode 100644 gnu/packages/patches/icecat-CVE-2016-1930-pt08.patch
 create mode 100644 gnu/packages/patches/icecat-CVE-2016-1930-pt09.patch
 create mode 100644 gnu/packages/patches/icecat-CVE-2016-1930-pt10.patch
 create mode 100644 gnu/packages/patches/icecat-CVE-2016-1930-pt11.patch
 create mode 100644 gnu/packages/patches/icecat-CVE-2016-1930-pt12.patch
 create mode 100644 gnu/packages/patches/icecat-CVE-2016-1930-pt13.patch
 create mode 100644 gnu/packages/patches/icecat-CVE-2016-1930-pt14.patch
 create mode 100644 gnu/packages/patches/icecat-CVE-2016-1930-pt15.patch
 create mode 100644 gnu/packages/patches/icecat-CVE-2016-1935.patch
 create mode 100644 gnu/packages/patches/icecat-bug-1146335-pt1.patch
 create mode 100644 gnu/packages/patches/icecat-bug-1146335-pt2.patch
 create mode 100644 
gnu/packages/patches/icecat-limit-max-buffers-size-for-ANGLE.patch
 create mode 100644 gnu/packages/patches/libarchive-bsdtar-test.patch
 delete mode 100644 gnu/packages/patches/librsvg-tests.patch
 create mode 100644 
gnu/packages/patches/libtiff-CVE-2015-8665+CVE-2015-8683.patch
 create mode 100644 gnu/packages/patches/libtiff-oob-accesses-in-decode.patch
 create mode 100644 gnu/packages/patches/libtiff-oob-write-in-nextdecode.patch
 delete mode 100644 gnu/packages/patches/linux-libre-CVE-2016-0728.patch
 create mode 100644 gnu/packages/patches/perl-CVE-2015-8607.patch
 create mode 100644 gnu/packages/patches/perl-deterministic-ordering.patch
 mode change 100644 => 100755 
gnu/packages/patches/perl-module-pluggable-search.patch
 create mode 100644 gnu/packages/patches/perl-no-build-time.patch
 create mode 100644 gnu/packages/patches/perl-source-date-epoch.patch
 delete mode 100644 gnu/packages/patches/perl-tk-x11-discover.patch
 create mode 100644 gnu/packages/patches/pinball-const-fix.patch
 create mode 100644 gnu/packages/patches/pinball-cstddef.patch
 create mode 100644 gnu/packages/patches/pinball-missing-separators.patch
 create mode 100644 gnu/packages/patches/pinball-src-deps.patch
 create mode 100644 gnu/packages/patches/pinball-system-ltdl.patch
 delete mode 100644 gnu/packages/patches/procps-make-3.82.patch
 create mode 100644 gnu/packages/patches/tophat-build-with-later-seqan.patch
 delete mode 100644 gnu/services/dmd.scm
 create mode 100644 gnu/services/shepherd.scm
 create mode 100644 tests/scripts-build.scm



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