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[gnuastro-commits] master updated (89db01d -> dd4d43e)
From: |
Mohammad Akhlaghi |
Subject: |
[gnuastro-commits] master updated (89db01d -> dd4d43e) |
Date: |
Fri, 16 Apr 2021 10:33:28 -0400 (EDT) |
makhlaghi pushed a change to branch master.
from 89db01d NEWS: minor edits in the parts for next stable release
new 3df6490 Crop works in 3D, except for --polygon
new 42e04b6 Recent changes in master merged
new a11e71c Merged with recent changes in master
new 17d6f65 Merged recent corrections in master
new f25b55e Merged with recent changes in master
new 73fdf0c MakeProfiles builds 3D ellipsoids
new d14384a Minor corrections in MakeProfiles manual
new 5abb468 Other minor corrections in the documentation
new 1483201 Noised cube created in make check
new 3e76e1f MakeProfiles --kernel builds 3D kernels also
new 03d73fe Some minor corrections in code and comments
new bdeaba9 Corrected name of 3D catalog for tarball inclusion
new 40f0a56 Minor corrections to MakeProfiles continued
new 87ab805 Identifiers for integer constants in BZERO comparisons
new 6b53c5e Bug fixes in master: commits 1ff1c25 and 540af65
new adeb1c6 NoiseChisel's convolution step in 3D completed
new ace4160 New --mcolisbrightness option for MakeProfiles
new f06acc5 Merged recent work from master
new 61aec7b Convolve name and dimensionality checks
new 8372486 NoiseChisel's detection complete in 3D
new 4627ddf NoiseChisel segmentation working in 3D, test added
new 1560a54 Default NoiseChisel kernel in 3D changed to 1.5 pixels
new 81f3f65 More --coordcol options acceptable in Crop
new e47f8db Merged recent work in master
new 4223e60 Suggestions on viewing/inspecting NoiseChisel's output
new 8fa5ff1 Minor edit in book (part added in last commit)
new 6cc3d25 No 3D projections in function to inspect NoiseChisel
outputs
new 4d2508f Fixed NoiseChisel opening and dilation and merged with
master
new e990860 Merged recent updates in master
new 6bdc5d6 Oversegmentation connectivity one less for 3D
new 6086579 Merged recent work in master (corrected conflicts)
new 6f4e484 Merged with recent updates in master
new be3bfd8 NoiseChisel configuration file in 3D updated
new b0d5fab Merged recent work from master, no conflicts
new 06798a5 Crop's --checkcenter works on 3D dataset
new 3b6c15d Merged with recent work in master, no conflicts
new fb3660f MakeCatalog works in 3D
new 4fedb9d Merged with master, conflicts fixed
new e92fd9c Merged recent work in master, conflicts fixed
new 9dda05c Merged recent work from the master branch with corrections
new 218a7db Brought in recent work from master, corrections made
new eb91303 Merged recent work in master, conflicts fixed
new 54b099d Neighbors options doc generalized for different dimensions
new 5cd3c1e Recent work in master merged, small conflicts fixed
new 325d717 3D matching now in Match program and library
new 737a0cd Merged recent corrections in master branch
new d7e0037 Brought in recent work in master
new 303e6e2 Incorporated recent work, minor conflict corrected
new 45bd003 Imported recent work in master, conflicts fixed
new fd51c80 Imported recent work from master, no conflicts
new 1b0046b Recent additions in master imported here, no conflicts
new 5831e9e Recent work in master imported, no conflicts
new e11098d Recent work in master imported, minor conflicts fixed
new b1ea932 Separate Segment program now available in 3D
new a4dbaba Recent work in master imported, minor conflict fixed
new ec3c102 Single to conditionally open ds9 for multi-HDU 2D or 3D
new 9285abe Imported recent work from master with corrections
new 0597cea Imported work in master, no conflicts
new 0a8324f MakeProfiles kernel option can be elongated in
3rd-dimension
new 6f85919 Connectivity of 2, for filling pseudo-detection holes in
3D
new 442d052 Imported work in master, no conflicts
new 1af4ea9 Correct checks for kernel dimension in NoiseChisel and
Segment
new c91d988 Recent work in master merged, conflicts corrected
new 2491c91 Imported work in master, minor conflict in book fixed
new d13c715 Imported work in master, no conflicts
new f537368 Segment's default 3D configuration file in tarball
new 486f915 Imported recent work in master, conflicts fixed
new 91f2d3e Imported recent work in master, conflicts fixed
new ee4bf1e Imported recent work from master, Segment's 3D kernels
added
new 63b4edd Imported work in master, conflicts fixed
new 133e277 Imported recent work from master, conflicts fixed
new 0ced9e5 Imported recent work in master, no conflicts
new 88935ae Dataset pointers initialized to NULL in
upperlimit_write_check
new d6051a1 Upperlimit magnitude in 3D, corrected creation of check
table
new 5dac3c3 Recent work in master imported, small conflict in book
fixed
new 2c6c7e0 Imported recent work, no conflicts
new 3882956 Narrow-band areas from MakeCatalog in 3D datasets
new 4021652 Imported recent work in master, conflicts fixed
new d02c999 Recent work in master imported, conflicts fixed
new 05cc693 Added 3rd dimension to MakeCatalog's minimum-maximum
columns
new 8d64628 Recent work in master imported, minor conflicts fixed
new 800c769 Imported all the work in master, conflicts fixed
new e2aba57 Recent work in master imported, conflicts fixed
new ac91655 Imported recent work in master, no conflicts
new a42ac37 Fixed MakeProfiles loop in checking radius values
new abe82cb Imported recent work in master, no conflicts
new d57e0e6 New spectrum measurement from 3D inputs in MakeCatalog
new a8428fe Imported recent work in master, conflicts fixed
new 22d0fba Imported recent work in master, no conflicts
new 1f9d941 Imported recent work in master, conflicts fixed
new 0eaf0dc Imported recent work in master, conflicts fixed
new 8edc804 Imported recent work in master, minor conflic fixed
new b5385f7 Projected spectra given NaN when no measurement on slice
new 9e2397a Imported recent work in master, no conflicts
new 175354f All MakeCatalog spectrums set to NaN when no measurement
was done
new 9258f68 Imported recent work in master, minor conflict fixed
new fe0e594 Imported recent work in master, no conflicts
new 924787b Updated copyright year in files specific to this branch
new 313d522 Imported recent work in master, minor conflict fixed
new fbbc2fc Imported recent work in master, minor conflict fixed
new 2dba72f Imported work in master, conflicts fixed, changes made
new b3416de Imported recent work in master, conflicts fixed
new ac2a821 Imported recent work in master, conflicts fixed
new 353c0c1 Imported recent work in master, conflict fixed
new f21c30f Imported recent work in master, no conflicts
new 5d5fd95 NoiseChisel: independent test of input's dimensions
new dadb3f3 Imported recent work in master, minor conflicts fixed
new 3f51e31 Imported work in master, conflicts fixed, corrections made
new d0d8d20 Imported recent work in master, minor conflicts fixed
new 536b056 Imported recent changes in master, conflicts in book fixed
new 6e11585 Imported recent work in master, minor conflicts fixed
new aa80ac4 Imported recent updates in master branch, minor conflict
fixed
new dd4d43e NoiseChisel and Segment: now working on 3D data cubes
Summary of changes:
NEWS | 14 +++
bin/noisechisel/Makefile.am | 4 +-
bin/noisechisel/args.h | 4 +-
...{astnoisechisel.conf => astnoisechisel-3d.conf} | 32 ++---
bin/noisechisel/detection.c | 83 +++++++++----
bin/noisechisel/kernel-3d.h | 130 +++++++++++++++++++++
bin/noisechisel/ui.c | 68 +++++++----
bin/segment/Makefile.am | 5 +-
.../{astsegment.conf => astsegment-3d.conf} | 10 +-
bin/segment/clumps.c | 48 +++++---
bin/segment/kernel-3d.h | 130 +++++++++++++++++++++
bin/segment/ui.c | 37 ++++--
doc/gnuastro.texi | 78 ++++++++++++-
tests/Makefile.am | 10 +-
.../simple-3d.sh => noisechisel/noisechisel-3d.sh} | 11 +-
.../simple-3d.sh => segment/segment-3d.sh} | 12 +-
16 files changed, 555 insertions(+), 121 deletions(-)
copy bin/noisechisel/{astnoisechisel.conf => astnoisechisel-3d.conf} (72%)
create mode 100644 bin/noisechisel/kernel-3d.h
copy bin/segment/{astsegment.conf => astsegment-3d.conf} (86%)
create mode 100644 bin/segment/kernel-3d.h
copy tests/{mkcatalog/simple-3d.sh => noisechisel/noisechisel-3d.sh} (80%)
copy tests/{mkcatalog/simple-3d.sh => segment/segment-3d.sh} (81%)
- [gnuastro-commits] master updated (89db01d -> dd4d43e),
Mohammad Akhlaghi <=
- [gnuastro-commits] master 17d6f65 004/113: Merged recent corrections in master, Mohammad Akhlaghi, 2021/04/16
- [gnuastro-commits] master 42e04b6 002/113: Recent changes in master merged, Mohammad Akhlaghi, 2021/04/16
- [gnuastro-commits] master f25b55e 005/113: Merged with recent changes in master, Mohammad Akhlaghi, 2021/04/16
- [gnuastro-commits] master a11e71c 003/113: Merged with recent changes in master, Mohammad Akhlaghi, 2021/04/16
- [gnuastro-commits] master 3df6490 001/113: Crop works in 3D, except for --polygon, Mohammad Akhlaghi, 2021/04/16
- [gnuastro-commits] master d14384a 007/113: Minor corrections in MakeProfiles manual, Mohammad Akhlaghi, 2021/04/16
- [gnuastro-commits] master 5abb468 008/113: Other minor corrections in the documentation, Mohammad Akhlaghi, 2021/04/16
- [gnuastro-commits] master 3e76e1f 010/113: MakeProfiles --kernel builds 3D kernels also, Mohammad Akhlaghi, 2021/04/16
- [gnuastro-commits] master 81f3f65 023/113: More --coordcol options acceptable in Crop, Mohammad Akhlaghi, 2021/04/16
- [gnuastro-commits] master e47f8db 024/113: Merged recent work in master, Mohammad Akhlaghi, 2021/04/16