module load python3/3.8.11
module load mpi/4.1.1-gcc-10.3.0-binutils-2.36.1
module load mpi4py/3.0.3-python-3.8.11-openmpi-4.1.1
module load scipy/1.6.3-python-3.8.11

wget https://github.com/xianyi/OpenBLAS/releases/download/v0.3.18/OpenBLAS-0.3.18.tar.gz
wget http://deb.debian.org/debian/pool/main/s/scalapack/scalapack_2.1.0.orig.tar.gz
wget http://deb.debian.org/debian/pool/main/s/scotch/scotch_6.1.1.orig.tar.xz
wget http://deb.debian.org/debian/pool/non-free/p/parmetis/parmetis_4.0.3.orig.tar.gz
wget http://deb.debian.org/debian/pool/main/m/mumps/mumps_5.4.1.orig.tar.gz
wget http://deb.debian.org/debian/pool/main/q/qhull/qhull_2020.2.orig.tar.gz
wget http://download-mirror.savannah.gnu.org/releases/getfem/stable/getfem-5.4.1.tar.gz

tar -zxf OpenBLAS-0.3.18.tar.gz
tar -zxf scalapack_2.1.0.orig.tar.gz
tar -xf scotch_6.1.1.orig.tar.xz
tar -zxf parmetis_4.0.3.orig.tar.gz
tar -zxf mumps_5.4.1.orig.tar.gz
tar -zxf qhull_2020.2.orig.tar.gz
tar -zxf getfem-5.4.1.tar.gz

cd OpenBLAS-0.3.18/
CC=gcc make -j8
CC=gcc make PREFIX=$HOME/tmp_opt/openblas install

cd ../scalapack-2.1.0/
sed '/^\(BLASLIB.*=\).*/ s//\1 $${HOME}\/tmp_opt\/openblas\/lib\/libopenblas.a/' SLmake.inc.example | sed '/^\(LAPACKLIB.*=\).*/ s//\1 /' > SLmake.inc
sed -i '/^\(NOOPT.*=.*-O0\)\(\>.*\)/s//\1 -fallow-argument-mismatch -fPIC\2/' SLmake.inc
sed -i '/^\(FCFLAGS.*=.*-O3\)\(\>.*\)/s//\1 -fallow-argument-mismatch -fPIC\2/' SLmake.inc
sed -i '/^\(CCFLAGS.*=.*-O3\)\(\>.*\)/s//\1 -fPIC\2/' SLmake.inc
sed -i '/^\(RANLIB.*=\).*/s//\1 echo/' SLmake.inc
make -j1
mkdir -p $HOME/tmp_opt/scalapack/lib
cp libscalapack.a $HOME/tmp_opt/scalapack/lib/

cd ../parmetis-4.0.3/
make config prefix=$HOME/tmp_opt/parmetis
make -j4
make install
cp build/Linux-x86_64/libmetis/libmetis.a $HOME/tmp_opt/parmetis/lib/
cp metis/include/metis.h $HOME/tmp_opt/parmetis/include/

cd ../scotch-6.1.1/src
cp Make.inc/Makefile.inc.x86-64_pc_linux2 Makefile.inc
sed -i '/^\(CC[SD].*=\).*/s//\1 mpicc/' Makefile.inc
make -j4 scotch
make -j4 esmumps
make -j4 ptscotch
make -j4 ptesmumps
mkdir -p $HOME/tmp_opt/scotch
cp -r ../lib $HOME/tmp_opt/scotch/
cp -r ../include $HOME/tmp_opt/scotch/


cd ../../MUMPS_5.4.1/
cp Make.inc/Makefile.inc.generic Makefile.inc
sed -i '/^#\(SCOTCHDIR.*\)=.*/s//\1 = $${HOME}\/tmp_opt\/scotch/' Makefile.inc
sed -i '/^#\(ISCOTCH.*\)=.*/s//\1 = -I$(SCOTCHDIR)\/include/' Makefile.inc
sed -i '/^#\(LSCOTCH.*-lpt.*\)/s//\1 -lscotch/' Makefile.inc
sed -i '/^#\(LMETISDIR.*\)=.*/s//\1 = $${HOME}\/tmp_opt\/parmetis\/lib/' Makefile.inc
sed -i '/^#\(IMETIS.*\)=.*/s//\1 = -I$${HOME}\/tmp_opt\/parmetis\/include/' Makefile.inc
sed -i '/^#\(LMETIS .*-lparmetis.*\)/s//\1/' Makefile.inc
sed -i '/^#\(ORDERINGSF .*-Dparmetis.*\)/s//\1/' Makefile.inc
sed -i '/^\(ORDERINGSF .*-Dpord$\)/s//#\1/' Makefile.inc
sed -i '/^\(CC.*= \)\(cc\)/s//\1mpi\2/' Makefile.inc
sed -i '/^\(FC.*= \)\(f90\)/s//\1mpi\2/' Makefile.inc
sed -i '/^\(FL.*= \)\(f90\)/s//\1mpi\2/' Makefile.inc
sed -i '/^\(RANLIB .*ranlib.*\)/s//#\1/' Makefile.inc
sed -i '/^#\(RANLIB .*echo.*\)/s//\1/' Makefile.inc
sed -i '/^\(LAPACK.*=\).*/s//\1/' Makefile.inc
sed -i '/^\(SCALAP.*=\).*/s//\1 $${HOME}\/tmp_opt\/scalapack\/lib\/libscalapack.a/' Makefile.inc
sed -i '/^\(INCPAR.*=\).*/s//\1/' Makefile.inc
sed -i '/^\(\LIBPAR.*=\).*/s//\1 $(SCALAP)/' Makefile.inc
sed -i '/^\(LIBBLAS.*=\).*/s//\1 $${HOME}\/tmp_opt\/openblas\/lib\/libopenblas.a/' Makefile.inc
sed -i '/^\(OPTF.*=.*\)-O\(\>.*\)/s//\1-fallow-argument-mismatch -O3 -fPIC\2/' Makefile.inc
sed -i '/^\(OPT[CL].*=.*\)-O\(\>.*\)/s//\1-O3 -fPIC\2/' Makefile.inc
make all
mkdir -p $HOME/tmp_opt/mumps
cp -r lib $HOME/tmp_opt/mumps/
cp -r include $HOME/tmp_opt/mumps/


cd ../qhull_2020.2/
make -j4
mkdir -p $HOME/tmp_opt/qhull
mkdir -p $HOME/tmp_opt/qhull/lib
mkdir -p $HOME/tmp_opt/qhull/include
mkdir -p $HOME/tmp_opt/qhull/include/libqhull
cp lib/libqhullstatic.a $HOME/tmp_opt/qhull/lib/libqhull.a
cp src/libqhull/*.h $HOME/tmp_opt/qhull/include/libqhull/

cd ../getfem-5.4.1
sed -i '/^\(.*\/env \)python\($\)/s//\1python3\2/' bin/extract_doc
PYTHONPATH=/appl/mpi4py/3.0.3-openmpi-4.1.1-gcc-10.3.0-binutils-2.36.1-python-3.8.11/lib/python3.8/site-packages/:$PYTHONPATH \
./configure --prefix="$HOME/tmp_opt" \
LDFLAGS="-L$HOME/tmp_opt/mumps/lib -L$HOME/tmp_opt/parmetis/lib -L$HOME/tmp_opt/scalapack/lib -L$HOME/tmp_opt/scotch/lib -L$HOME/tmp_opt/qhull/lib" \
CPPFLAGS="-I$HOME/tmp_opt/mumps/include -I$HOME/tmp_opt/parmetis/include -I$HOME/tmp_opt/qhull/include" \
LIBS="-lmumps_common -lpord -lgfortran -lscalapack -lptesmumps -lptscotch -lptscotcherr -lscotch -lparmetis -lmetis -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh" \
--with-blas="$HOME/tmp_opt/openblas/lib/libopenblas.a" \
--with-pic --with-optimization=-O3 --disable-matlab --enable-python --enable-paralevel=2
make -j4
make install