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[ESPResSo-users] Thermostat
From: |
Muhammad Anwar |
Subject: |
[ESPResSo-users] Thermostat |
Date: |
Wed, 6 Apr 2011 14:21:00 +0200 |
User-agent: |
Thunderbird 2.0.0.24 (X11/20101027) |
Hi,
Dear Users,
I am using Langevin thermostat, and i am trying to set the temperature
of the MD simulation 300 K, I entered the thermostat as
thermostat langevin 300 1.0
then to check the temperature
set Temp [expr [analyze energy
kinetic]/$n_part/([degrees_of_freedom]/2.0)] // No rotation just
translaional dof are included.
puts -nonewline "run $i at time=$time, Temp= $Temp (2.3566e-09), tempe=
[setmd temperature] (300.0)"
They both have different values, should not they be same?
Secondly i used temp in KT by putting
set T 300
set kT [expr $T * 1.38e-23/epsilon(kcal/mol)]
thermostat langevin $kT 1.0
i found following message
Failed upon creating one of the monomers in Espresso!
Aborting...
Can anybody help in setting the temperature? Thank you very much.
Best regards,
Muhammad Anwar
- [ESPResSo-users] Thermostat,
Muhammad Anwar <=