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Refresher on including R/ggplot2 output via latex/pdf?
From: |
John Hendy |
Subject: |
Refresher on including R/ggplot2 output via latex/pdf? |
Date: |
Sun, 27 Oct 2019 23:16:00 -0500 |
Greetings,
I used to use orgmode + R/ggplot2 for some time, but for various
reasons I've been using python almost exclusively for a couple years.
I just went to use what I think is how I used to include ggplot2
results in PDF experts, but it's not working.
In referring to the documentation, this is listed as an example:
- https://orgmode.org/worg/org-contrib/babel/languages/ob-doc-R.html#org046a0ff
* does produce a file, by using :results output
#+begin_src R :file 3.png :results output graphics
library(lattice)
xyplot(1:10 ~ 1:10)
#+end_src
My test file:
-----
* test
#+begin_src R :results output graphics :exports results :file foo.png
library(ggplot2)
df <- data.frame(x=c(1, 2), y=c(2, 4))
p <- ggplot(df, aes(x = x, y = y)) + geom_point()
print(p)
#+end_src
-----
I'm using emacs -Q, followed by M-x load-file RET path/to/min-config:
-----
;; set load paths
;; set load dirs and global config options
(add-to-list 'load-path "~/.elisp/org/lisp/")
(add-to-list 'load-path "~/.elisp/org/contrib/lisp/")
(add-to-list 'load-path "~/.elisp/ess/lisp/")
(require 'ess-site)
; setup babel languages
(org-babel-do-load-languages
'org-babel-load-languages
'((R . t)))
-----
M-x org-version: Org mode version 9.2.4 (release_9.2.4-381-g226363 @
/home/jwhendy/.elisp/org/lisp/)
When I run the code, the #+RESULTS: output is just blank. foo.png *is*
generated, but the file link ([[foo.png]]) I'd expect is not getting
inserted. It also, unsurprisingly, does not show in the file.
Hmmm. One last hail Mary google incantation before I sent this off
suggests that perhaps it's :results file now? Or :results graphics
file?
-
https://stackoverflow.com/questions/50054520/python-vs-r-in-org-mode-babel-output-graphics
Thanks for any pointers. I'd be happy to assist with updated
documentation if the earlier link is now outdated/incorrect.
Best regards,
John
- Refresher on including R/ggplot2 output via latex/pdf?,
John Hendy <=
- Re: Refresher on including R/ggplot2 output via latex/pdf?, Jack Kamm, 2019/10/28
- Re: Refresher on including R/ggplot2 output via latex/pdf?, John Hendy, 2019/10/28
- Re: Refresher on including R/ggplot2 output via latex/pdf?, Jack Kamm, 2019/10/28
- Re: Refresher on including R/ggplot2 output via latex/pdf?, John Hendy, 2019/10/28
- Re: Refresher on including R/ggplot2 output via latex/pdf?, Jack Kamm, 2019/10/28
- Re: Refresher on including R/ggplot2 output via latex/pdf?, John Hendy, 2019/10/28
- Re: Refresher on including R/ggplot2 output via latex/pdf?, Berry, Charles, 2019/10/28
- Re: Refresher on including R/ggplot2 output via latex/pdf?, John Hendy, 2019/10/28
- Re: Refresher on including R/ggplot2 output via latex/pdf?, Jack Kamm, 2019/10/28
- Re: Refresher on including R/ggplot2 output via latex/pdf?, John Hendy, 2019/10/29