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Re: [O] Warnings while installing org-ref


From: John Kitchin
Subject: Re: [O] Warnings while installing org-ref
Date: Fri, 26 May 2017 16:06:52 -0400
User-agent: mu4e 0.9.19; emacs 25.2.1

I pushed a bunch of commits today to clean up a lot of these. There are
still a few that I don't know how to get rid of, but it should be a lot
cleaner now.

Lars Bjørndal writes:

> I installed org-ref from Elpa, and I got some warnings. Emacs version:
>
> GNU Emacs 25.2.1 (x86_64-redhat-linux-gnu, GTK+ Version 3.20.10) of 2017-05-02
>
> I'm not sure how critical these error messages are.
>
> Fri May 26 14:59:37 2017
> Entering directory `/home/tstl/.emacs.d/elpa/key-chord-20160227.438/'
>
> In key-chord-input-method:
> key-chord.el:341:16:Warning: sit-for called with 3 arguments, but
> accepts only
>     1-2
> i May 26 14:59:45 2017
> Entering directory `/home/tstl/.emacs.d/elpa/helm-core-20170526.36/'
>
> In helm-position:
> helm-lib.el:388:14:Warning: macro `helm-position' defined too late
>
> In end of data:
> helm-lib.el:1006:1:Warning: the following functions are not known to be
> defined\
> :
>     helm-interpret-value, helm-get-current-source
>
> Compiling file
> /home/tstl/.emacs.d/elpa/helm-bibtex-20170321.1306/bibtex-comple\
> tion.el at Fri May 26 14:59:54 2017
> Entering directory `/home/tstl/.emacs.d/elpa/helm-bibtex-20170321.1306/'
>
> In end of data:
> bibtex-completion.el:1210:1:Warning: the following functions are not
> known to b\
> e defined:
>     reftex-what-macro, org-find-property,
>         reftex-locate-bibliography-files
>
> Entering directory `/home/tstl/.emacs.d/elpa/org-ref-20170523.1821/'
>
> In end of data:
> doi-utils.el:1361:1:Warning: the following functions are not known to be
> define\
> d:
>     org-ref-find-bibliography, reftex-get-bib-field,
>         org-ref-bib-citation
>
> Compiling file
> /home/tstl/.emacs.d/elpa/org-ref-20170523.1821/org-ref-bibtex.el\
>  at Fri May 26 14:59:57 2017
>
> In org-ref-bibtex-assoc-pdf-with-entry:
> org-ref-bibtex.el:728:25:Warning: reference to free variable
>     `org-ref-pdf-directory'
>
> In orhc-bibtex-field-formatter:
> org-ref-bibtex.el:1092:27:Warning: reference to free variable
>     `org-ref-pdf-directory'
>     org-ref-bibtex.el:1098:27:Warning: reference to free variable
>         `org-ref-notes-directory'
>
> In end of data:
> org-ref-bibtex.el:1324:1:Warning: the following functions are not known
> to be d\
> efined:
>     reftex-get-bib-field, org-ref-find-bibliography
>
> Compiling file
> /home/tstl/.emacs.d/elpa/org-ref-20170523.1821/org-ref-citeproc.\
> el at Fri May 26 14:59:57 2017
>
> In end of data:
> org-ref-citeproc.el:919:1:Warning: the function
>     `org-ref-get-bibtex-key-and-file' is not known to be defined.
>
> Compiling file
> /home/tstl/.emacs.d/elpa/org-ref-20170523.1821/org-ref-core.el a\
> t Fri May 26 14:59:57 2017
>
> In org-ref-update-pre-post-text:
> org-ref-core.el:3259:16:Warning: `delete-backward-char' is for
> interactive use
>     only; use `delete-char' instead.
>     org-ref-core.el:3260:12:Warning: `delete-backward-char' is for
>     interactive use
>         only; use `delete-char' instead.
>
> In end of data:
> org-ref-core.el:3498:1:Warning: the following functions are not known to
> be def\
> ined:
>     org-ref-match-next-cite-link, org-ref-match-next-label-link,
>         org-ref-match-next-ref-link,
>             org-ref-make-org-link-cite-key-visible,
>             org-in-commented-heading-p
>
> Compiling file
> /home/tstl/.emacs.d/elpa/org-ref-20170523.1821/org-ref-helm-bibt\
> ex.el at Fri May 26 14:59:58 2017
>
> In org-ref-format-citation:
> org-ref-helm-bibtex.el:308:22:Warning: assignment to free variable `end'
> org-ref-helm-bibtex.el:313:37:Warning: assignment to free variable
> `path'
> org-ref-helm-bibtex.el:313:37:Warning: reference to free variable `end'
> org-ref-helm-bibtex.el:311:16:Warning: looking-back called with 1
> argument,
>     but requires 2-3
>     org-ref-helm-bibtex.el:313:18:Warning: reference to free variable
>     `path'
>
> In org-ref-helm-load-completions-async:
> org-ref-helm-bibtex.el:367:22:Warning: assignment to free variable
>     `bibtex-completion-cached-candidates'
>     org-ref-helm-bibtex.el:371:20:Warning: assignment to free variable
>         `bibtex-completion-bibliography-hash'
>
> In org-ref-browser:
> org-ref-helm-bibtex.el:681:20:Warning: `show-all' is an obsolete
> function (as
>     of 25.1); use `outline-show-all' instead.
>     org-ref-helm-bibtex.el:712:61:Warning: assignment to free variable
>         `count-key-pos'
>         org-ref-helm-bibtex.el:715:68:Warning: reference to free
>         variable
>             `count-key-pos'
>
> Compiling file
> /home/tstl/.emacs.d/elpa/org-ref-20170523.1821/org-ref-helm.el a\
> t Fri May 26 14:59:58 2017
>
> In org-ref:
> org-ref-helm.el:289:78:Error: `add-to-list' can't use lexical var
> `matches';
>     use `push' or `cl-pushnew'
>     org-ref-helm.el:317:54:Error: `add-to-list' can't use lexical var
>     `matches';
>         use `push' or `cl-pushnew'
>         org-ref-helm.el:306:39:Error: `add-to-list' can't use lexical
>         var `matches';
>             use `push' or `cl-pushnew'
>             org-ref-helm.el:380:47:Warning: reference to free variable
>             `org-latex-prefer-user-labels'
>
> Compiling file
> /home/tstl/.emacs.d/elpa/org-ref-20170523.1821/org-ref-pdf.el at\
>  Fri May 26 14:59:59 2017
>
> In end of data:
> org-ref-pdf.el:248:1:Warning: the following functions are not known to
> be defin\
> ed:
>     pdf-view-assert-active-region, pdf-view-active-region-text,
>         pdf-view-deactivate-region
>
> Lars


--
Professor John Kitchin
Doherty Hall A207F
Department of Chemical Engineering
Carnegie Mellon University
Pittsburgh, PA 15213
412-268-7803
@johnkitchin
http://kitchingroup.cheme.cmu.edu



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