bug#64438: closed ([PATCH] gnu: Add python-gatspy.)

[GNU bug Tracking System]

Your message dated Mon, 03 Jul 2023 17:46:21 +0200
with message-id <875y71t2sy.fsf@elephly.net>
and subject line [PATCH] gnu: Add python-gatspy.
has caused the debbugs.gnu.org bug report #64438,
regarding [PATCH] gnu: Add python-gatspy.
to be marked as done.

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-- 
64438: https://debbugs.gnu.org/cgi/bugreport.cgi?bug=64438
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> --- Begin Message ---
>
>
>
> Subject: 
>
> [PATCH] gnu: Add python-gatspy.
>
>
>
>
> Date: 
>
> Mon, 3 Jul 2023 15:08:11 +0000
>
>
>
>
> * gnu/packages/bioinformatics.scm (python-gatspy): New variable.
> ---
>  gnu/packages/bioinformatics.scm | 28 ++++++++++++++++++++++++++++
>  1 file changed, 28 insertions(+)
>
> diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
> index 0f3f64b98f..47ea11fa53 100644
> --- a/gnu/packages/bioinformatics.scm
> +++ b/gnu/packages/bioinformatics.scm
> @@ -3477,6 +3477,34 @@ (define-public python-pysam
>  also includes an interface for tabix.")
>      (license license:expat)))
>  
> +(define-public python-gatspy
> +  (package
> +    (name "python-gatspy")
> +    (version "0.3")
> +    (source (origin
> +              (method url-fetch)
> +              (uri (pypi-uri "gatspy" version))
> +              (sha256
> +               (base32
> +                "1gw2z6x8nikvnw2gkdl70gr81cwczd1pd7v8ry2kjn6k4kssrfav"))))
> +    (build-system pyproject-build-system)
> +    (arguments
> +     (list #:test-flags '(list "-k"
> +                               ;; These tests require internet access
> +                               (string-append "not test_download_data.py"
> +                                " and not test_rrlyrae.py"
> +                                " and not test_rrlyrae_lightcurves"
> +                                " and not test_rrlyrae_generated.py"
> +                                " and not test_lomb_scargle.py"
> +                                " and not test_supersmoother.py"
> +                                " and not test_templates.py"))))
> +    (propagated-inputs (list python-numpy python-scipy))
> +    (native-inputs (list python-pytest python-nose python-setuptools-scm))
> +    (home-page "https://github.com/astroml/gatspy";)
> +    (synopsis "General tools for astronomical time series in Python")
> +    (description "General tools for astronomical time series in Python")
> +    (license license:bsd-2)))
> +
>  (define-public python-twobitreader
>    (package
>      (name "python-twobitreader")
>
> base-commit: 29ccd7cac93da290e1d0466a1d33748ad4ccbf08
> prerequisite-patch-id: 2e072dec7e75b2dcc08789c562b9c3f8491fc05f
> -- 
> 2.34.1
>
>
>
>
> --- End Message ---
> --- Begin Message ---
>
>
>
> Subject: 
>
> [PATCH] gnu: Add python-gatspy.
>
>
>
>
> Date: 
>
> Mon, 03 Jul 2023 17:46:21 +0200
>
>
>
>
> User-agent: 
>
> mu4e 1.10.3; emacs 28.2
>
>
>
>
> Thanks for the patch!
>
> I noticed that some of the tests only failed because we didn’t have
> astroML.  So I packaged it and added it to the inputs, so now only two
> tests are disabled.
>
> Pushed it to the master branch with commit
> 07f083e94f4f5c5f53e4d8aa644de2064a6256c9.
>
> -- 
> Ricardo
>
>
> --- End Message ---