bug#56159: closed ([PATCH] gnu: Add r-asset.)

[GNU bug Tracking System]

Your message dated Mon, 31 Oct 2022 21:41:15 +0100
with message-id <87a65bd8uc.fsf@elephly.net>
and subject line [PATCH] gnu: Add r-asset.
has caused the debbugs.gnu.org bug report #56159,
regarding [PATCH] gnu: Add r-asset.
to be marked as done.

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-- 
56159: https://debbugs.gnu.org/cgi/bugreport.cgi?bug=56159
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> --- Begin Message ---
>
>
>
> Subject: 
>
> [PATCH] gnu: Add r-asset.
>
>
>
>
> Date: 
>
> Thu, 23 Jun 2022 12:02:44 +0200
>
>
>
>
> * gnu/packages/bioconductor.scm (r-asset): New variable.
> ---
>  gnu/packages/bioconductor.scm | 26 ++++++++++++++++++++++++++
>  1 file changed, 26 insertions(+)
>
> diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
> index 1e87b190c2..98e7ee104d 100644
> --- a/gnu/packages/bioconductor.scm
> +++ b/gnu/packages/bioconductor.scm
> @@ -2029,6 +2029,32 @@ (define-public r-aneufinder
>  sequencing data.")
>      (license license:artistic2.0)))
>  
> +(define-public r-asset
> +  (package
> +    (name "r-asset")
> +    (version "2.14.0")
> +    (source (origin
> +              (method url-fetch)
> +              (uri (bioconductor-uri "ASSET" version))
> +              (sha256
> +               (base32
> +                "029acl5k9d4hnvy3jia9cr4rk6w31zn8b5s79i6lazq1cp236hbg"))))
> +    (properties `((upstream-name . "ASSET")))
> +    (build-system r-build-system)
> +    (propagated-inputs (list r-mass r-msm r-rmeta))
> +    (native-inputs (list r-knitr))
> +    (home-page "https://bioconductor.org/packages/ASSET";)
> +    (synopsis
> +     "Subset-based association analysis of heterogeneous traits and subtypes")
> +    (description
> +     "This package is an @code{R} programme for the subset-based analysis of
> +heterogeneous traits and disease subtypes.  @code{ASSET} allows the user to
> +search through all possible subsets of z-scores to identify the subset of 
> traits
> +giving the best meta-analyzed z-score.  Further, it returns a p-value adjusting
> +for the multiple-testing involved in the search.  It also allows for searching
> +for the best combination of disease subtypes associated with each variant.")
> +    (license license:gpl2)))
> +
>  (define-public r-biocversion
>    (package
>      (name "r-biocversion")
>
> base-commit: e74fa406e1043547242a8b67ab9907fea7aae6b9
> -- 
> 2.36.1
>
>
>
>
> --- End Message ---
> --- Begin Message ---
>
>
>
> Subject: 
>
> [PATCH] gnu: Add r-asset.
>
>
>
>
> Date: 
>
> Mon, 31 Oct 2022 21:41:15 +0100
>
>
>
>
> User-agent: 
>
> mu4e 1.8.9; emacs 28.1
>
>
>
>
> Applied, thanks!
>
> -- 
> Ricardo
>
>
> --- End Message ---