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01/10: gnu: Add r-wrench.
From: |
guix-commits |
Subject: |
01/10: gnu: Add r-wrench. |
Date: |
Wed, 3 Apr 2019 11:42:25 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 8830664d614f6a84df6f5153eee85761a20d24ed
Author: Ricardo Wurmus <address@hidden>
Date: Wed Apr 3 16:12:06 2019 +0200
gnu: Add r-wrench.
* gnu/packages/bioconductor.scm (r-wrench): New variable.
---
gnu/packages/bioconductor.scm | 24 ++++++++++++++++++++++++
1 file changed, 24 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 750311f..b09d195 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -4040,3 +4040,27 @@ chromatographically separated and single-spectra mass
spectral data. It
imports from AIA/ANDI NetCDF, mzXML, mzData and mzML files. It preprocesses
data for high-throughput, untargeted analyte profiling.")
(license license:gpl2+)))
+
+(define-public r-wrench
+ (package
+ (name "r-wrench")
+ (version "1.0.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "Wrench" version))
+ (sha256
+ (base32
+ "12gfdj2p52pah67bimz14xcwmcb4c2snjwswj0fns7v3v1h9rlqg"))))
+ (properties `((upstream-name . "Wrench")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-limma" ,r-limma)
+ ("r-locfit" ,r-locfit)
+ ("r-matrixstats" ,r-matrixstats)))
+ (home-page "https://github.com/HCBravoLab/Wrench")
+ (synopsis "Wrench normalization for sparse count data")
+ (description
+ "Wrench is a package for normalization sparse genomic count data, like
+that arising from 16s metagenomic surveys.")
+ (license license:artistic2.0)))
- branch master updated (8079008 -> 307586c), guix-commits, 2019/04/03
- 01/10: gnu: Add r-wrench.,
guix-commits <=
- 04/10: gnu: Add r-webbioc., guix-commits, 2019/04/03
- 02/10: gnu: Add r-wiggleplotr., guix-commits, 2019/04/03
- 08/10: gnu: Add r-progeny., guix-commits, 2019/04/03
- 07/10: gnu: Add r-rbowtie2., guix-commits, 2019/04/03
- 09/10: gnu: Add r-arrmdata., guix-commits, 2019/04/03
- 05/10: gnu: Add r-zfpkm., guix-commits, 2019/04/03
- 06/10: gnu: r-rcas: Add upstream name., guix-commits, 2019/04/03
- 10/10: gnu: Add r-arrmnormalization., guix-commits, 2019/04/03
- 03/10: gnu: Add r-widgettools., guix-commits, 2019/04/03