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01/01: gnu: flexbar: Fix reproducibility bug.


From: guix-commits
Subject: 01/01: gnu: flexbar: Fix reproducibility bug.
Date: Wed, 27 Feb 2019 09:40:54 -0500 (EST)

rekado pushed a commit to branch master
in repository guix.

commit 8aa1ca85ac5ab4853076d5dd36eea33e42fede4d
Author: Ricardo Wurmus <address@hidden>
Date:   Wed Feb 27 15:39:51 2019 +0100

    gnu: flexbar: Fix reproducibility bug.
    
    * gnu/packages/bioinformatics.scm (flexbar)[arguments]: Add phase
    "do-not-tune-to-CPU".
---
 gnu/packages/bioinformatics.scm | 5 +++++
 1 file changed, 5 insertions(+)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index fa672cb..21ad0ea 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -2715,6 +2715,11 @@ results.  The FASTX-Toolkit tools perform some of these 
preprocessing tasks.")
     (arguments
      `(#:phases
        (modify-phases %standard-phases
+         (add-after 'unpack 'do-not-tune-to-CPU
+           (lambda _
+             (substitute* "src/CMakeLists.txt"
+               ((" -march=native") ""))
+             #t))
          (replace 'check
            (lambda* (#:key outputs #:allow-other-keys)
              (setenv "PATH" (string-append (getcwd) ":" (getenv "PATH")))



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