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01/02: gnu: Add r-abhgenotyper.
From: |
Ricardo Wurmus |
Subject: |
01/02: gnu: Add r-abhgenotyper. |
Date: |
Thu, 13 Sep 2018 13:19:03 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 1efcd0f1ea980472659805d91a2bb486b4136f81
Author: pimi <address@hidden>
Date: Mon Sep 3 15:45:20 2018 +0200
gnu: Add r-abhgenotyper.
* gnu/packages/cran.scm (r-abhgenotyper): New variable.
Signed-off-by: Ricardo Wurmus <address@hidden>
---
gnu/packages/cran.scm | 26 ++++++++++++++++++++++++++
1 file changed, 26 insertions(+)
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 7d65dfb..a05834d 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -5736,3 +5736,29 @@ to obtain a practically sound, highly interpretable
model.")
Axon Instruments/Molecular Devices software. Only files recorded in gap-free
mode are currently supported.")
(license license:artistic2.0)))
+
+(define-public r-abhgenotyper
+ (package
+ (name "r-abhgenotyper")
+ (version "1.0.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "ABHgenotypeR" version))
+ (sha256
+ (base32 "08cpmnaaxsm5c5bjifnfxdlvg5inrf13biqpcl2yq5zpqjmiki0l"))))
+ (properties `((upstream-name . "ABHgenotypeR")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-ggplot2" ,r-ggplot2)
+ ("r-reshape2" ,r-reshape2)))
+ (home-page "https://github.com/StefanReuscher/ABHgenotypeR/")
+ (synopsis "Visualize and manipulate ABH genotypes")
+ (description
+ "The @code{r-abhgenotyper} package provides simple imputation,
+error-correction and plotting capacities for genotype data. The package is
+supposed to serve as an intermediate but independent analysis tool between the
+TASSEL GBS pipeline and the @code{r-qtl} package. It provides functionalities
+not found in either TASSEL or @code{r-qtl} in addition to visualization of
+genotypes as \"graphical genotypes\".")
+ (license license:gpl3)))