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03/05: gnu: mash: Update to 2.0.
From: |
Ben Woodcroft |
Subject: |
03/05: gnu: mash: Update to 2.0. |
Date: |
Thu, 29 Mar 2018 22:44:11 -0400 (EDT) |
benwoodcroft pushed a commit to branch master
in repository guix.
commit f38ac742e6f542110cf838646a35c325201def51
Author: Ben Woodcroft <address@hidden>
Date: Sun Mar 4 10:32:56 2018 +1000
gnu: mash: Update to 2.0.
* gnu/packages/bioinformatics.scm (mash): Update to 2.0.
---
gnu/packages/bioinformatics.scm | 8 +++++---
1 file changed, 5 insertions(+), 3 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index cf36b36..af515c0 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -3775,7 +3775,7 @@ sequences).")
(define-public mash
(package
(name "mash")
- (version "1.1.1")
+ (version "2.0")
(source (origin
(method url-fetch)
(uri (string-append
@@ -3784,7 +3784,7 @@ sequences).")
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
- "08znbvqq5xknfhmpp3wcj574zvi4p7i8zifi67c9qw9a6ikp42fj"))
+ "00fx14vpmgsijwxd1xql3if934l82v8ckqgjjyyhnr36qb9qrskv"))
(modules '((guix build utils)))
(snippet
;; Delete bundled kseq.
@@ -3802,7 +3802,9 @@ sequences).")
(modify-phases %standard-phases
(add-after 'unpack 'fix-includes
(lambda _
- (substitute* '("src/mash/Sketch.cpp" "src/mash/CommandFind.cpp")
+ (substitute* '("src/mash/Sketch.cpp"
+ "src/mash/CommandFind.cpp"
+ "src/mash/CommandScreen.cpp")
(("^#include \"kseq\\.h\"")
"#include \"htslib/kseq.h\""))
#t))