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Re: [ESPResSo-users] problem fom installing the ESPResSo


From: Jean-Noël Grad
Subject: Re: [ESPResSo-users] problem fom installing the ESPResSo
Date: Wed, 17 Apr 2019 15:29:54 +0200
User-agent: Mozilla/5.0 (X11; Linux i686; rv:60.0) Gecko/20100101 Thunderbird/60.6.1

Hello,

If you get a segfault with other samples as well, it means something went wrong during compilation. If you compile espresso in debug mode (cmake3 -DCMAKE_BUILD_TYPE=Debug -DCMAKE_CXX_FLAGS=-Og ..), there should be a trace. Without it, it's very difficult to diagnostic a segfault. If you're familiar with debugging tools such as gdb, you may try to locate the source of the issue yourself, but it's tedious work.

Using our CentOS 7 Dockerfile (https://github.com/espressomd/docker/blob/master/docker/centos/Dockerfile-7) I set up two CentOS containers, one with openmpi and one with mpich (just by text substitution, got the 3.0.4 version). Both compiled espresso and ran the rigid_body.py just fine. There might be some interaction with your installed packages which we can't reproduce in our infrastructure.

Best regards,
JN

On 4/17/19 12:06 PM, ricky wrote:
Hello,

I followed you advice but there is nothing in trace.log but only the
Segmentation fault.

Best regards!

Ricky Zhao





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