[Top][All Lists]
[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]
Re: [ESPResSo] Restarting a simulation with clusters of particles
From: |
Olaf Lenz |
Subject: |
Re: [ESPResSo] Restarting a simulation with clusters of particles |
Date: |
Thu, 03 Apr 2008 11:53:38 +0200 |
User-agent: |
Mozilla/5.0 (X11; U; Linux x86_64; en-US; rv:1.8.1.12) Gecko/20080227 Thunderbird/2.0.0.12 Mnenhy/0.7.5.666 |
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Lorenzo Isella wrote:
> I save all the particle positions (and the velocities, but they do not
> matter for this discussion here) as returned by Espresso (they will be
> outside the box).
> However, when I read them, again, Espresso does not understand that
> the particles are not far away, but are actually grouped into 100
> clusters.
What do you mean by "Espresso does not understand that the particles are
not far away"? What does ESPResSo do that you didn't expect?
The only thing that comes to my mind that might be your problem: did you
set the system size BEFORE you load the particle coordinates? If you
first set the particle coordinates, and only afterwards the system size,
the coordinates will be changed when changing the system size, which
might lead to unexpected results.
Olaf
-----BEGIN PGP SIGNATURE-----
Version: GnuPG v1.4.6 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org
iD8DBQFH9KkitQ3riQ3oo/oRAtVrAKCrSzmMRq15B8hrrlIUg+Y+flFVYQCeIQXT
d+V5bU5BAS9qYZQGfQqqD3g=
=ESAb
-----END PGP SIGNATURE-----